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genetica:bioinf_process [2015/03/12 10:43] – vifehe | genetica:bioinf_process [2020/08/04 10:58] (current) – external edit 127.0.0.1 |
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The broad institute has developed [[https://www.broadinstitute.org/gatk/|GATK]], a series of bioinformatic tools to analyze NGS data from the raw files produced by the sequencing service to the files ready for statistical analysis. | The broad institute has developed [[https://www.broadinstitute.org/gatk/|GATK]], a series of bioinformatic tools to analyze NGS data from the raw files produced by the sequencing service to the files ready for statistical analysis. |
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As GATK indicates in his [[https://www.broadinstitute.org/gatk/guide/best-practices | Best Practives for Varaint Discovery workflow]]*, WES bioinformatic workflow is divided in three main sections that are meant to be performed sequentially: | As GATK indicates in his [[https://www.broadinstitute.org/gatk/guide/best-practices | Best Practices for Variant Discovery workflow]]*, WES bioinformatic workflow is divided in three main sections that are meant to be performed sequentially: |
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